Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHRIVIVGGGAGGLELATRLGRTLGKRGKAQVTLVDANLTHIWK--PLLHEVAAGSLNSSEDELNYVAQAKWNHFEFQLG-RMQGLDRAGKRVRLAALVDENGVELVPERDIAYDTLVIAVGSTTNDFGTEGAAE-HCIFLDTRAQAERFHRQLLGQYLRAHTGHDANNNAVSIAIIGAGATGVELAAELHHAAQMLAAYGLDRIRPEDLHISLVEAGPRVLPAL-PERISQPVHQTLSKLGVRVMTGSAVSKVDAD-----GLWTGDGEFVPATLKVWAAGIRAPAF-LKELDGLESNRINQLVVRPTLQTTRDDDIFAFGDCAACPQPAQPGEQPRNVPPRAQAAHQQASLLVKSLRARLEGKPLGEYHYRDYGSLISLSRFSAVGNLMGNLMGSVMLEGWLARMFYVSLYRMHQMALYGPLRTAMLMLSGRLRSTEPRLKLH |
| 3LXD Chain:A ((9-321)) | -RADVVIVGAGHGGAQAAIALRQNG---FEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLG-----------DGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAEL-------------DAGAKNAVVIGGGYIGLEAAAVLTKF---------------GVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISA-GA--SGGNGVDVDEFCRT-SLTDVYAIGDCAAHANDFAD--GAVIRLESVQNANDMATAAAKDICGA------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -195601 for 2517 contacts (-77.7/contact) +
2D Compatibility (PS) -32514 + (NN) -10036 + (LL) 9212
1D Compatibility (HY) -12800 + (ID) 4000
Total energy: -245739.0 ( -97.63 by residue)
QMean score : 0.477
|
|
|