Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
1CJ1 Chain:E ((1-96))
--------------------------------------------------------PHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIE-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1CJ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59581 for 669 contacts (-89.1/contact) +
2D Compatibility (PS) -10480 + (NN) -7619 + (LL) 6184
1D Compatibility (HY) -13200 + (ID) 4800
Total energy: -89496.0 ( -133.78 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_1CJ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CJ1-query.scw
PDB file :
Tito_Scwrl_1CJ1.pdb
: