Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS
1O2E Chain:A ((1-122))
----------------------ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYMQAMKLDSCKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLDMKN----
General information:
TITO was launched using:
RESULT:
Template:
1O2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58028 for 894 contacts (-64.9/contact) +
2D Compatibility (PS) -12831 + (NN) -8487 + (LL) 2456
1D Compatibility (HY) -16400 + (ID) 4750
Total energy: -98040.0 ( -109.66 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_1O2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O2E-query.scw
PDB file :
Tito_Scwrl_1O2E.pdb
: