Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
3CON Chain:A ((19-185))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG-----------MRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPT-RTVDTKQAHELAKSY-GIPFIETSAKTRQGVEDAFYTLVREIRQYR---------------
General information:
TITO was launched using:
RESULT:
Template:
3CON.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95073 for 1292 contacts (-73.6/contact) +
2D Compatibility (PS) -16772 + (NN) -3961 + (LL) 2220
1D Compatibility (HY) -18800 + (ID) 4400
Total energy: -136786.0 ( -105.87 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_3CON.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CON-query.scw
PDB file :
Tito_Scwrl_3CON.pdb
: