Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNPLLILTFVAAALAAPFDDDDKIVGGYNCEENSVPYQVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHPQYDRKTLNNDIMLIKLSSRAVINARVSTISLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAANS
2TRM Chain:A ((1-223))-----------------------IVGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNNIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN-


General information:
TITO was launched using:
RESULT:

Template: 2TRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129944 for 1918 contacts (-67.7/contact) +
2D Compatibility (PS) -24052 + (NN) -11105 + (LL) 1716
1D Compatibility (HY) -29200 + (ID) 8900
Total energy: -201485.0 ( -105.05 by residue)
QMean score : 0.750

(partial model without unconserved sides chains):
PDB file : Tito_2TRM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2TRM-query.scw
PDB file : Tito_Scwrl_2TRM.pdb: