Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGWARALLLAAVLVVMACLVPAATASLHAEETLTSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT-DSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSG--HTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDAS--SWMTYTGGVMTSCVSEQLDHGVLLVGYNDS-AAVPYWIIKNSWTTQWGEEGYIRIAKGS----NQCLVKEEASSAVVGGPGPTPEPTTTTTTSAPGPSPSYFVQMSCTDAACIVGCENVTLPTGQCLLTTSGVSAIVTCGAETLTEEVFLTSTHCSGPSVRSSVPLNKCNRLLRGSVEFFCGSSSSGRLADVDRQRRHQPYHSRHRRL |
| 2FO5 Chain:A ((3-226)) | -------------------------------------------------------------------------------------------------------------------------DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN--NGGLITEAAYPYRAARGTCNVARAAQNSPV-VVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTY--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116859 for 1884 contacts (-62.0/contact) +
2D Compatibility (PS) -23130 + (NN) -8259 + (LL) 16944
1D Compatibility (HY) -14000 + (ID) 4850
Total energy: -150154.0 ( -79.70 by residue)
QMean score : 0.299
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