Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDPGAAAPLSSLGLCALVLALLGALSAGAGAQPYH-GEKGISVPDHG-FCQPISI-PLCTDIAYNQTILPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELRFFLCSMYAPVCTVLDQAIPPCRSLCERARQGCEALMNKFGFQWPER-LRCENFP-VHGAGEICVGQNTSDGSGGPGGGPTAYPTAPYL------PDLPFTALPPGASDGRG-----------RPAFPFSCPRQLKVPPYLGYRF--LGER--DC----------------GAPCEP---------GRANGLMYFKEEERRFARLWVGVWSVLC--CASTLFTVLTYL------------VDMRRFSYPERPIIFLSGCYFMVAVAHVAGF-----------------LLEDRAVCVERFSDDGYRTVAQGTKKEGCTILFMVLYFFGMASS-IWWVILSLTWFLAAG-MKW---GHEAIEANSQYFHLAAWAVPAVKTITILAMGQVD--GDLLSGVCYVGLSSVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTI-MKHDGTK--TEKLEKLMVRIGVFSVLYT----VPATIVLACYFYEQA---FREHW----ERTWLLQTCKSYAVPCPPGHFPPMSPDFTVFMIK----------YLMTMIVGITTGFWIWSGK-TLQSWRRFYHRLSHSSKGETAV |
| 1YO8 Chain:A ((4-624)) | -------------DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVP----RCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPEN----PCKDKTHNCHKHAECIYLG---HFSDPMYKCECQTGYAGDGLICGED--SDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNC-QLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDGDGVG---DHCDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQ----DNCPY-ISNANQADHDRDGQGDACDPDDDNDGVPDDRDNCRLVFNPDQEDLDGDG-RGDICKDDFDNDNIPDIDDVCPENNAISETDFRNFQMVPLDPKGTTQIDPNWVIRHQGKELVQTANSDPGIAVGFDEFGSVDFSGTFYVNTDRDDDYAGFVF----------------GYQSSSRFYVVMWKQVTQTYWEDQPTRAYGYSGVSLKVVNSTTGTGEHLRNALWHTGNTPGQVRTLWHDPRNIGW-----KDYTAYRWHLTHRPKTGYIRVLVHEGKQVMADSGPIYDQTYAGGRLGLFVFSQEMVYFSDLKYECRD---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264941 for 3630 contacts (-73.0/contact) +
2D Compatibility (PS) -51916 + (NN) 3534 + (LL) 4668
1D Compatibility (HY) 4000 + (ID) 5050
Total energy: -309705.0 ( -85.32 by residue)
QMean score : 0.093
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