Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELAVGNLSEGNASWPEPPAPEPGPLFGIGVENFVTLVVFGLIFALGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGCIWALSIAMASPVAYHQGLFHPRASNQTFCWEQWPDP--RHKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNMS-----------------------------------------KKSEASKKKTAQTVLVVVVVFGISWLPHHI---IHLWAEFGVFPLTPASFLFRITA-----HCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCHIRKDSHLSDTKESKSRIDTPPSTNCTHV |
| 4XNV Chain:A ((38-382)) | --------------------SFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHM--KPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSLGRLK-KKNAICISVLVWLIVVVAISPILFYSG-TGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196011 for 2136 contacts (-91.8/contact) +
2D Compatibility (PS) -29508 + (NN) -13159 + (LL) 2388
1D Compatibility (HY) -29200 + (ID) 4100
Total energy: -269590.0 ( -126.21 by residue)
QMean score : 0.200
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