Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MRTLLPPALLTCWLLA--PVNSIH---PECRFHLEIQEEETKCAELLRSQTEKHKACSGVWDNITCW--RPANVGETVTVPCPKVFS-----------------NFYSKAGNISKNCTSDGWSETFPDFVDACGYSDPEDESKITFYILVKAIYTLGYSVSLMSLATGSIILCLFRKLHCTRNYIHLNLFLSFI-LRAI--SVLVKDDVLYSSSGTLHCPDQPSSWVGCKLS------LVFLQY----CIMANFFWLLVEGLYLHTLLVAMLPPRRCFLAYLLIGWGLPTVCIGAWTAARLYLEDTGC-----------------WDTNDHSVPWWVIRIPILIS-----IIVNFV-LFISIIRILLQKLT----SPDVGGNDQSQYKRLAKSTLLLI----PLFGVHYMVFAVFPISIS--SKYQILFELCLGS---FQGLVVAVLYCFL--------NSEVQCELKRKWRSRCPTPSASRDYRVCGSSFSRNGSEG--ALQFHRGSRAQSFLQTETSVI------------------------------------------ |
| 4Q86 Chain:A ((2-583)) | TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQ--TVYIPMNIIGNL-YVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265288 for 3249 contacts (-81.7/contact) +
2D Compatibility (PS) -45242 + (NN) -5765 + (LL) 96
1D Compatibility (HY) -10400 + (ID) 4000
Total energy: -330599.0 ( -101.75 by residue)
QMean score : 0.113
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