Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MARNYYEIL----EYVAPEEINKAYKRLGLKCHPDK-LLPKKRKISRIVKKAINGAALSKLELEEMQSL
2GUZ Chain:A ((1-71))
GFLKGGFDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGISK---------
General information:
TITO was launched using:
RESULT:
Template:
2GUZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15756 for 324 contacts (-48.6/contact) +
2D Compatibility (PS) -5544 + (NN) -1321 + (LL) 1140
1D Compatibility (HY) 400 + (ID) 550
Total energy: -21631.0 ( -66.76 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_2GUZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GUZ-query.scw
PDB file :
Tito_Scwrl_2GUZ.pdb
: