Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEKKLKAAVVLSGCGHLDGAEVREVVLSLLVLDQ--QEVEVKCFAPDINITQVVNHKTTEAVKEKRNVLVEAARVARSEICDLKEAKAEDFDMLVVPGGYGVAKNLSDLAEDKEVVTVIPEFERLVSEFFATKKPIGAICISPAIIVS--ILSSKTSKGESKIKVTIGDDREKLIEKLGGEHIKCDTGLSIEDEEHNVFSCSAYMR---RDESTYSVYQGIKHMIDSMVKKTNKRI
3MGK Chain:A ((2-183))
----SYRIDVLL-----FNKFETLDVFGPVEIFGNLQDDFELNFISSDGGLVESS-----------QKVRV-------ETSLYTR--DENIEKILFVPGGSGTR-EKV----------NDDNFINFIGNMVKESKYIISVCTGSALLSKAGILNG--------KRATTNKRSFKWVTEQNEDVLW-VKEARWV-KDGNIYTSSGVSAGIDMTLGFIEDLIG-KEKALEISRSIEYFW
General information:
TITO was launched using:
RESULT:
Template:
3MGK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107648 for 1460 contacts (-73.7/contact) +
2D Compatibility (PS) -18843 + (NN) -2761 + (LL) 3156
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -133846.0 ( -91.68 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_3MGK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MGK-query.scw
PDB file :
Tito_Scwrl_3MGK.pdb
: