Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRLEGRKFLVTGASGGIGQAIVKTMHKAGAILCVSGTKKETLEGVAKLYEKNIYI---LPCNLLNTEEVNQLINRASKLMGGLDGLVCNAGVTQDSLLLRMTDEAWQKVVDINLSSTFKLNREAYKKLTKNNWGRIINISSIIGLTGNAGQANYAASKAGIIAMSKSIAKEVASRNITVNCIAPGFMDTKMTKILTEEQKKKILDNIPMKRMGTGEEIAAGVLFLASDEAKYITGHVLNINGGLFM
4BO6 Chain:C ((25-268))
---LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRD---------EWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIG---GAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM
General information:
TITO was launched using:
RESULT:
Template:
4BO6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132223 for 1929 contacts (-68.5/contact) +
2D Compatibility (PS) -24886 + (NN) -9697 + (LL) 1708
1D Compatibility (HY) -16800 + (ID) 5100
Total energy: -186998.0 ( -96.94 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_4BO6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BO6-query.scw
PDB file :
Tito_Scwrl_4BO6.pdb
: