Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQATYASISLPGISSVEDVLEDARFGKLFILVDDENRENEGDLIVLAEKLKPEHVAFMVRYGTGIVFLAMTRLHMGRLGLEFMRRSNIDEKLTPHTAFTTSIDAR-YGIATGVSAHDRTHTILTAIDGKSTQDDIITPGHVFPIIANDGGVLARNGHTEASVEIAKLIGYNHAAVGCELVNDD-----------GSMMRLPELLKFAEQHNIKLTTIDKLIRYIKKLS
1K4I Chain:A ((12-223))
-------------FDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTHNAD-P--RGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTE
General information:
TITO was launched using:
RESULT:
Template:
1K4I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142636 for 1680 contacts (-84.9/contact) +
2D Compatibility (PS) -21959 + (NN) -7716 + (LL) 1296
1D Compatibility (HY) -11600 + (ID) 3800
Total energy: -186415.0 ( -110.96 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_1K4I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K4I-query.scw
PDB file :
Tito_Scwrl_1K4I.pdb
: