Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSLTDL---TRVANLIKKDVDKGYRIIVVVSAIAGLTDQMVFQARQTLNL---------------------------S------------------HKQALSEYDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESKIKTIKI-----DHLKRSFAEGYTVAIIAGFQGIYD-DRITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFKE-VEGTAVLHENDVLERHTITGITYSTNEALITFTNFAN------TLRTLKDMAGANIKIDMIHGS----SIVISEFDIDLMKE------LLNKNE--DYV-INNNAAKISIIGIGV------MSVMYHTLKFFSEKKIEILAITASEIKISIIVQRECAEALVRDLHTELMCTEGG |
| 2J0W Chain:A ((3-449)) | ------------------EIVVSKFGGTSVADFDAMNRSADIVLSDA---NVRLVVLSASAGITNLLVALAEGLEPGERFEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAAALAT-SPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKV-MRTNDRFGRAEPDIAALAELAALQLLPRLN-E-GLVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPRAGGTLVCNKTE--NPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALIGNDLSKACGVGKEVFGVL---EPFNIRMICYGASSHNLCFLVPGEDAEQVVQKLHSNLFE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251511 for 3131 contacts (-80.3/contact) +
2D Compatibility (PS) -39619 + (NN) -11517 + (LL) 2012
1D Compatibility (HY) -19600 + (ID) 5200
Total energy: -325435.0 ( -103.94 by residue)
QMean score : 0.446
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