Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIGSPVILAPMSGVTDYPFRSIVKKLGASLLVSEMIASRAM--IMQ----------------------T--------RQSM-Q---KA---KVDELTAVQLAGC-EPDIMAEAAKLNEDMGAKIIDINFGCPVKKVVNGYAGSALMRNEKKAAEIIEAVVKAVNVPVTVKIRTGWNNENRNAPRLAKIAEDLGAKMITVHGRTR----------------------AQLYNGQA----DWKFIRNVKEQV-KIPVIVNGDIKSLNDIQNALKESRADGVMIGRGAYG-RPWLINQAINFLSGSEVSEPTASEKLSIILEHYDNILEYYGNDAGIKIARKHIGWYSSGFKNSSEFRVRVNNMTDSMEVKENIVSFFSQV |
| 1GTE Chain:A ((542-835)) | -FINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMG------LACGQDPELVRNICRWVRQAVQIPFFAKLTPNVT----DIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLH-SGASVLQVCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQSPGTESHQKGKPVPRIAELMGKKLPNFGPYLEQRKKIIAEEKMRLKEQNERKPFIPKKPI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142418 for 1933 contacts (-73.7/contact) +
2D Compatibility (PS) -23954 + (NN) -7313 + (LL) 360
1D Compatibility (HY) -2000 + (ID) 1850
Total energy: -177175.0 ( -91.66 by residue)
QMean score : 0.530
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