Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRITFL-AKQKVEEYSSRVTGFDILQ---PDISKEAIALRVNGELYDLSREIESDTEIDVIQLNDEEGLDIIRHDAAHIMAQAVKELFPNAQVTIGPTIQDGFYYDFAIDHTFTTDDLAAIEKKMKEIIKSNHRFIREVWARKQAINFFSSIGEKYKVDIISSIPESEDLTVYRQGDFVDLCRGPHSPSTSRVKAFKLMKVAGAYWRGNVKGPMLQRIYGTAWRNKDELNIYLKRLEEAKKRDHRRIAKDMDLFHIQEEAV-GQVFWHEQGYTLYNVLESYIRKKLINNGYAEVKTPILVSKELWEKSGHWDKFRENMFIVDES-ESKKLAIKPMNCPCHVQIFNSYTRSYRNLPIRMAEFGMCHRNESSGSLHGLMRVRGFTQDDAHIFCMEEQVNSETVKFCALLKEVYSELGFNEISVKFSDRP----NVRAGDNEVWDRAEKALLEAVKEAGLSYELNPGEGAFYGPKLEFILKDAIGRSWQCGTLQVDFILPERLGAFYIGADGQKYHPVMLHRAILGTFERFIGILIEHYAGKFPLWLAPTQLVILTVTN-EADNYATEISNVLKEQGVRVKTDLTNEKVSYKIRLHSSNKVPILWIVGKNEVASKTVSVRNLGSEKQESSSCEKAVKLLLKKVLI |
| 1NYR Chain:A ((4-640)) | ---INIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIEIVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFEQIEKTMKQIVNENMKIERKVVSRDEAKELFSN--DEYKLELIDAIPEDENVTLYSQGDFTDLCRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -326994 for 5020 contacts (-65.1/contact) +
2D Compatibility (PS) -66951 + (NN) -20927 + (LL) 544
1D Compatibility (HY) -50400 + (ID) 13450
Total energy: -478178.0 ( -95.25 by residue)
QMean score : 0.535
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