Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEKYSFKEVENKYNILWEDSRVYKWDG---KKENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDIFYPIGFDDNGLPTERLVEQTYKTR-------AREVGRE----KFIEMCHEVIEKSKQEFKELLRSVGISYDWSLEYHTIS--KETVTLSQMSFIDLYNKGYAYRKMQPILWDPVDKTAIAQAEIEDKVC--ESSLNTITFSTEE---NEQIDIATTRPELFLACVAVFCHPEDARY--------------------------------------AHLIGKTSVVPIIGVKVPIIADGRVKIDKGTGLVMCCTFGDELDIY----------WQQKHNLPM---KIIIDQDGKINLDSMYDNNRSQYQGIGMTGERSTG-VIKEGAISPHYDVIPVRNTRIYDEINGLKVKEARKKIIKILTERGLLTGSTNISHSVKCAERSG-VSLEILPTYQWFIKTL--DQKAQVLDKVKECNWYPSTMRKRMEVWIEGLNWDWCISRQRYFGVPFPV---WYSRRKGE-EGKVILAEVEDLPVDPLKDLPKG-YSKEEVVPDQDVMDTWATSAITPQL------SALAVNSEFS-LPDHRYNTIFPADLRSQSHEIIRTWAFYTILKAYYHAN-SLPWKNIMVSGWCLADDKKKMSKSKGNIITPKSILDTYGADVVRYWTAN-SRLGVDTVYSENILKIGKRLVTKLWNASKFVSIFMERYQAVSINSVSETMDQWILSKLYKVIEKATNNLLQFEYCEALGAVEGFFWKDFCDNYLELAKKRAYGDKVSSKANLSAKQSLTYVLNTILRLLAPFLPYITEQIYHQLYSDNSVHNRGNWPNKEELIYDKHSEEMGDKFMQILNLVRKIKADNNVSVKHLIKKLMIKANVKEDKLNQSAQNDLQTVCNAEMIEWSENAQAGLITENGKFIVSIDLY |
| 1WZ2 Chain:A ((4-861)) | -----LNFKAIEEKWQKRWLEAKIFEPNIRDKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGSPIVGIAERIKNRDPKTIWIYRDVYKVPEEILWTFEDPINIVKYFMKAAKETFIRAGFSVDWSREFYTTSLFPPFSKFIEWQFWKLKEKGYIVKGAHRVRWDPVVGTPLGDHDLMEGEDVPILDYIIIKFELRENGEVIYLPAATLRPETVYGVTNMWVNPNATYVKAKVRRKDKEETWIVSKEAAYKLSFQDREIEVIEEFKGEKLIGKYVRNPVSGDEVIILPAEFVDPDNATGVVMSVPAHAPFDHVALEDLKRETEILEKYDIDPRIV---------FPAVE---------EVNKLGIKSQKDKEKLEQATKTIYKAEYHKGIFKVPPYEGKPVQEVKEAIAKEMLEKGIAEIMYEFAEKN-VISRFGNRAVIKIIHDQWFIDYGNPEWKEKARKALERMKILPETRRAQFEAIIDW-LDKKACARKIGLGTPLPWDPEWVIESLSDSTIYMAYYTISRH---INKLRQEGKLDPEK--LTPEFFDYIFLEEFSEDKEKELEKKTG-IPAEIIHEMKEEFEYWYPLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWPKGIAVNGFGT-LEGQKMSKSKGNVLNFIDAIEENGADVVRLYIMSLAEHDSDFDWRRKEVGKLRKQIERFYELISQFAEYEVK-----GNVELKDIDRWMLHRLNKAIKETTNALEEFRTRTAVQWAFYSIMN-DLRWYLRRTEGRDD---------EAKRYVLRTLADVWVRLMAPFTPHICEELWEKLGGEGFVS-LAKWPEPVEEWWNETIEAEEEFIRSVMEDIKEIIEVAKIENAKRAYIYTAEDWKWKVAEVVSEKRDFKSSMEELMKDSEIRKHGKEVAKIVQKLIKERTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WZ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -279560 for 5988 contacts (-46.7/contact) +
2D Compatibility (PS) -78239 + (NN) -10491 + (LL) 2832
1D Compatibility (HY) -23200 + (ID) 8100
Total energy: -396758.0 ( -66.26 by residue)
QMean score : 0.315
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