Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYTGSLYLSLISLLQN-HTFQPEEKVCLFSYGSGAVGEIFSGSIVKGYDKALDKEKHLNMLESREQLSVEEYETFFNRFDNQEFDFERELTQDPYSKVYLYSIEDHIRTYKIEK
3SQZ Chain:A ((313-422))
IYTGSLFLGLLSLLENSQNLVAGDKIALFSYGSGAVAEIFTGTLVKGFKEQLQT-NRLDKLKRRTPLSVENYEKIFFEEAQLDDKGNASFKEYQTGPFALKEILEHQRIYGKV-
General information:
TITO was launched using:
RESULT:
Template:
3SQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13847 for 519 contacts (26.7/contact) +
2D Compatibility (PS) -10763 + (NN) -19 + (LL) 308
1D Compatibility (HY) 8000 + (ID) 400
Total energy: 10973.0 ( 21.14 by residue)
QMean score : 0.152
(partial model without unconserved sides chains):
PDB file :
Tito_3SQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SQZ-query.scw
PDB file :
Tito_Scwrl_3SQZ.pdb
: