Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNTKYF----LAVGAVASVLTLG------ACGNSNSQDQG---NKTEQKTKSEDSNVKTDKTKHLTGTFSSKNGETV-----EGKAEIKNGKLMLTNYKSSKGPDLYVYLTKNGDI----KNGKEIAMVDYDKEKQTFDLKNVDLSKYDEVTIYCKKAH---VIFGGAKLK--------------------------------------------------------------------------- |
| 1SQJ Chain:A ((4-786)) | YEFKNVAIGGGGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPALDSIYLSTDAGATWKDVTQLSSPSNLEGNWGHPTNAARYKDGTPVPWLDFNNGPQWGGYGAPHGTPGLTKFGWWMSAVLIDPFNPEHLMYGTGATIWATDTLSRVEKDWAPSWYLQIDGIEENAILSLRSPKSGAALLSGIGDISGMKHDDLTKPQKMFGAPQFSNLDSIDAAGNFPNVVVRAGSSGHEYDSACARGAYATDGGDAWTIFPTCPPGMNASHYQGSTIAVDASGSQIVWSTKLDEQASGPWYSHDYGKTWSVPAGDLKAQTANVLSDKVQ--DGTFYATDGGKFFVSTDGGKSYAAKGAGLVTG--TSLMPAVNPWV--AGDVWVPVPEGGLFHSTDFGA-----SFTRVGTANATLVSVGAPKAPSAVFIWGTDKPGSDIGLYRSDDNGSTWTRVNDQEHNYSGPTMIEADPKVYGRVYLGTNGRGIVYADLTNEEKSTAKCANGQKGTHCY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 57829 for 900 contacts (64.3/contact) +
2D Compatibility (PS) -14123 + (NN) 5017 + (LL) 964
1D Compatibility (HY) -3600 + (ID) 1850
Total energy: 44237.0 ( 49.15 by residue)
QMean score : 0.156
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