Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENV-TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIE-WQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMST-FSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
4H3D Chain:B ((45-252))
-----------------------------CLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGD---EVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMSGMGVISRLCGEIFGSALTFGAAKSVSAPGQISFKELNSVLNL-
General information:
TITO was launched using:
RESULT:
Template:
4H3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117680 for 1574 contacts (-74.8/contact) +
2D Compatibility (PS) -22522 + (NN) -14168 + (LL) 3504
1D Compatibility (HY) -19200 + (ID) 3500
Total energy: -173566.0 ( -110.27 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_4H3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H3D-query.scw
PDB file :
Tito_Scwrl_4H3D.pdb
: