Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWNKNRLTQMLSIEYPIIQAGMAGSTTPKLVASVSNSGGLGTIGAGYFNTQQLEDEIDYVRQLTSNSFGVNVFVPSQQSYTSSQIENMNAWLKPYRRALHLEEPVVKIIEEQQFKCHIDTIIKKQVPVCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVSIPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETDTVVTKAFSGKLARGINNRFIEEMSQYEGDIP--D-Y-PIQNELTSSIRKAAANIGDKELTHMWSGQSPRLATTH-PANTIMSNIINQINQIMQYK |
2Z6I Chain:A ((1-312)) | --MKTRITELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSP-----------------------------------FVEDIVDLVIEEGVKVVTTGAGNPS-KYMERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIGKL----------TTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKILKARDIDTTISAQHFGHAVRAIKNQLTRDFELAEKDAFKQ-DLEIFEQMGAGALA-KAVVHGDVDGGSVMAGQIAGLVSKEETAEEILKDLYYGAAKKIQE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162052 for 2871 contacts (-56.4/contact) +
2D Compatibility (PS) -32508 + (NN) -7002 + (LL) 4300
1D Compatibility (HY) -17200 + (ID) 5350
Total energy: -219812.0 ( -76.56 by residue)
QMean score : 0.438
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