Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPT-ATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
4HY7 Chain:A ((18-164))
------------------------GRIVMELYKDAVPRTVENFRALCTGEKGVGKSGKPLHYKGSAFHRVIPDFMCQGGDFTRGNGTGGESIYGEKFADEKFVHKHTKPGILSMANAGPNTNGSQFFICT---VPCN-------------------------WLDGKHVVFGEVVEGMDVVKNI--EKVGSRSGTCSKQVV-------
General information:
TITO was launched using:
RESULT:
Template:
4HY7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49124 for 1042 contacts (-47.1/contact) +
2D Compatibility (PS) -14399 + (NN) -6438 + (LL) 3448
1D Compatibility (HY) -10400 + (ID) 3500
Total energy: -80413.0 ( -77.17 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_4HY7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HY7-query.scw
PDB file :
Tito_Scwrl_4HY7.pdb
: