Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLQTTYPSNNYPIFVEHGAID--HISTYID--QFDQSFILIDEHVNQYFADKFDDILSYENV--------HKVIIPAGEKTKTFEQYQETLEYILSHH--VTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILA-HDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFKDREIL-------------QSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEYNHK--IAHGHAVMIGIIYQFIVANILFNSNH-DIQHYINYLTKLGYPLETIT-DI---------DFETIYQYMLSDKKNDKQGVQMVLIKHFGDIVVQ---HIDQTTLQHACEQLKTYFK |
| 1SG6 Chain:A ((10-391)) | --------LGRESIIADFGLWRNYVAKDLISDCSSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSA-----GLRNLLNWGHSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKK-------IVLLSAIGTPYETRASVVANEDIRVVL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238009 for 2787 contacts (-85.4/contact) +
2D Compatibility (PS) -34847 + (NN) -6195 + (LL) 1912
1D Compatibility (HY) -22000 + (ID) 4950
Total energy: -304089.0 ( -109.11 by residue)
QMean score : 0.571
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