Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVDH----------------IAGRIEAGKGNDVLGILCHVDVVP--AGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEE-----------MPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQ-----YGFEVKLGKVQPPHYVDKNDPFVQKLVTAYRNQTNDMTEPYTIGG-----GTYARNLDKGVAFGAMFSDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE |
| 2ZOG Chain:A ((1-478)) | SPNSMSALKAVFQYIDENQDRYVKKLAEWVAIQSV------SAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVY------GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSLH--------------GIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMI------------PEVVSEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLP-VGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83839 for 3499 contacts (-24.0/contact) +
2D Compatibility (PS) -45908 + (NN) -13095 + (LL) 3124
1D Compatibility (HY) -6000 + (ID) 3800
Total energy: -149518.0 ( -42.73 by residue)
QMean score : 0.353
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