Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMINKLIVPVTASALLLGACGASATDSKENTLISSKAGDVTVADTMKKIGKDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKALQQQGLTADKYKENLRTAAYHKELLSDKIKISDSEIKEDSK------------------KASHILIKVKSKKSDK-------EGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHIIKADKPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAYKDLLKEYDVDFKDRDIKSVVEDKILNPEKLKQGGAQGGQSGMSQ |
| 1YW5 Chain:A ((10-177)) | -----------------------------------------------------------------------------------------------PNWTIRVSRSH-NKEYFLNQSTNESSWDPP-----YGTDKEVLNAYIAKFKNNGYKPLVNEDGQVRVSHLLIKNNQSRKPKSWKSPDGISRTRDESIQILKKHLERILSGEVKLSELANTESDC-SSHDRGGDLGFFSKGQMQPPFEEAAFNLHVGEVSNIIETNSGVHILQRTG--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 39317 for 1012 contacts (38.9/contact) +
2D Compatibility (PS) -15405 + (NN) -3379 + (LL) 10896
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: 25329.0 ( 25.03 by residue)
QMean score : 0.385
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