Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQ-KLEAYHANGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGLFARASWGQDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLS--DRAVAERAGLGFVGRNGF-VINPKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFLTQTK-GYMPDQYR-YKIGNRLYGCDTCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLRMSN--KEFKQTYGHLAGA-WRGKKPIQRNAIL-------ALAHFNEVDAIPELKKVATTDERPMIRATAYWAIG--QILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE |
| 4USR Chain:A ((1-357)) | ---GPAMPPILD-VIVIGGGQAALTTAYFLRRTSLSYLLLDEQPGPGGAWLHAWDSLR----LFSPAAWSSIA---GWPMPSPTEPGNPT------------RNDVIDYLRRYEDRYQFPIQRPVRVDTVTRLDDLWRVQAGDQQWLARAVISATGTWSKPFIPPYEGRELFQGAQIHSAHYRTPAPFAGK----RVMVVGGGNSGAQVLAELSSVSETLWITQEPPAFLPDEVDGRVLFERATARWKAQQEGRSIDEPAGGFGDIVMVPPVREARERGVLVAERPFARFTET-----GVEWADGRRENLDAVIWCSGFRPALDHLRELGVVEADGKVQVEDTR-VVKQPNLWLVGYGDWTGMASATLIGVTRTAR--STADQVVQALTATP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4USR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69216 for 2695 contacts (-25.7/contact) +
2D Compatibility (PS) -34537 + (NN) 755 + (LL) 1680
1D Compatibility (HY) -6400 + (ID) 3500
Total energy: -111218.0 ( -41.27 by residue)
QMean score : 0.214
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