Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWR---------KQNNITAEIKSTDE-----LHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNAREIEVAVLGNDYPEATWPGEVVKDVAFYDYKSKYKDGKVQ------LQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINETNAMPGFTAFSMYPKLWENMGLSYPELITKLIELAKERHQDKQKNKYKID |
3SE7 Chain:D ((6-340)) | -----IGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGITKSGAWQLCDGPGENWEDGNCRPAVLSPDRSVHGLLVLEQGKYETIR-----------LDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNFWTVTADE---------KIPTDQLTYPVFVKPARSGSSFGVSKVAREEDLQGAVEAAREYDSKVLIEEAVIGTEIGCAVMGNG-PELI-TGEVDQITLS-------------GSDNSAVTVPADISTTSRSLVQDTAKAVYRALGCRGLSRVDLFLTEDGKVVLNEVNTFPGMTSYSRYPRMMTAAGLSRADVIDRLVSLA--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -160908 for 2503 contacts (-64.3/contact) +
2D Compatibility (PS) -33101 + (NN) -15731 + (LL) 3124
1D Compatibility (HY) -22800 + (ID) 5750
Total energy: -235166.0 ( -93.95 by residue)
QMean score : 0.586
|
|
|