Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLNKEQRRITAEELQAHFEESTLSVQMIAEKLNVTTEDVEKVLAMTAPLGIFSHQLQRFIHLVWDVRDVINDNIKGNGQTPEPYTYLKGEKEDYWFLR
1QBJ Chain:A ((6-70))
-SIYQDQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGT--PPLWKIA-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QBJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26211 for 434 contacts (-60.4/contact) +
2D Compatibility (PS) -7077 + (NN) -1957 + (LL) 1624
1D Compatibility (HY) 0 + (ID) 550
Total energy: -34171.0 ( -78.74 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_1QBJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QBJ-query.scw
PDB file :
Tito_Scwrl_1QBJ.pdb
: