Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------MQEFLGFGV--VGNFAGHLEQAGESHSFINMKSEEKDAPKGLFPFYIPYENCYLGRC----CINNHKIILPSDPDLRVQAEPEIALECDVKYDEKHLVTKLVPNFFMAFNDASVRNLEATKLSQKKNFSPASKGIGQKLPIDRFVYGGVCNNFSIASFLKYDNVWHIYGENSKLLKYEFFYQKLLDWIKNQLNHQQDGDSLEALRPFLERHNFPT--KMIFAIGATPYMPFAQEHFLQKGDEVVIVAYNH--LQYSFEKIQNLLEEDALQ---TKEHANLSYVYQIVE------------------- |
| 4KBL Chain:A ((101-554)) | YRYEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFDGNMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVEC-NRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHD-PVKCKWLKKWIKKCIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCW--VCLGPWEPHGSAWYNCNRYNRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40773 for 1757 contacts (-23.2/contact) +
2D Compatibility (PS) -27165 + (NN) 2761 + (LL) -176
1D Compatibility (HY) -14800 + (ID) 1900
Total energy: -82053.0 ( -46.70 by residue)
QMean score : 0.094
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