Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MEKLVIG--SRGSELALWQA-NHIKERLKKECSMESEIRIVKTTGDKILDAPLNKIGGKGLFTKELEELLLKGAIDLAVHSLKDVPVVFEK--GLDLACITKRADVRD--TFLSVKFPDLMSLPK--GAKVGT---TSLRRSMQIKFKRKDLDTESLRGN---VQTRLKKLECGEFDAIILAEAGLCRLNVQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITLQKLNNEESAFCCHLEREFIKGLNGGCQIPIGVHANLMGDEVKIRAVLGLPNGKEVIAKEKQGD----KTKAFDLVQELLEEFLQSG--AKEILEKAQLF---- |
| 3E4R Chain:A ((25-315)) | AAEPAQLRIGYQKAVSSLVLAKQHRLLEQRFPR-----TKITWVEFPA-----------------GPQLLEALNVGSIDLGGAG--DIPPLFAQAAGADLLYVGWVPPTPKAETILVPSKSALRTVADLKGKRIAFQKGSSAHNLLLRVLAKSGLSMRDITPLYLSPANARAAFAAGQVDAWAIWDPWYSALTLDG-------SARLLANGEG-------LGLTGGFFLSSRRYATAWGPFVQQVMGTLNQADGLLER-----DRAGSIKTLAQVSGLPPAVVERTLAHRPPASVQPLSAQVIKAQQATADLFYAQRLLPKRVLVAPAVWRAPD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44202 for 2190 contacts (-20.2/contact) +
2D Compatibility (PS) -28418 + (NN) -11803 + (LL) 2620
1D Compatibility (HY) -6400 + (ID) 2150
Total energy: -90353.0 ( -41.26 by residue)
QMean score : 0.359
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