Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYK-KGYKVGVFDADIGLANLDVIFGVKT-HKNILHALKGEA-----KLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDRFVDEEGVLSSLDYIVIDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYACIKINSK-N--KDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSS-LLKRYVRERKILRKIAPNDLFSQSIDQIASLLVSKLETGTLEIPKEGLKSFFKRLLKYLG |
| 3EA0 Chain:A ((3-242)) | -------------------------AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLPFGDLDMYLSGNTHSQDLADISNASDRLDKSLLDTMVQHISPSLDLIPSPATFEKIVNIEP-ERVSDLIHIAA--SFYDYIIVDFGASIDHVGVWVLEHLDELCIVTTPSLQSLRRAGQLLKLCKEFEKPISRIEIILNRADTNSRIT------SDEIEKV---IGRPISKRIPQDEDAMQESLLSGQSVLKVAPKSQLSKTIVDWALHL---------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141588 for 1937 contacts (-73.1/contact) +
2D Compatibility (PS) -24899 + (NN) -10619 + (LL) 4116
1D Compatibility (HY) -14000 + (ID) 2650
Total energy: -189640.0 ( -97.90 by residue)
QMean score : 0.537
|
|
|