Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALFEDIQAVIAEQLNVDAAQVTPEAEFVKDLGADSLDVVELIMALEEKFNIEIPDEQAEKIVNVGDVVKYIEDNKLA
2X2B Chain:A ((6-77))
---LERVTKIIVDRLGVDEADVKLEASFKEDLGADSLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQ---
General information:
TITO was launched using:
RESULT:
Template:
2X2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51110 for 474 contacts (-107.8/contact) +
2D Compatibility (PS) -7697 + (NN) -2597 + (LL) 912
1D Compatibility (HY) -8400 + (ID) 2000
Total energy: -70892.0 ( -149.56 by residue)
QMean score : 0.815
(partial model without unconserved sides chains):
PDB file :
Tito_2X2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X2B-query.scw
PDB file :
Tito_Scwrl_2X2B.pdb
: