Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNGLEEKGYKAAVIKFDAASESDFVEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIENNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLYM
4BO7 Chain:D ((23-268))
MSLQGKVALVTGASRGIGQAIALELGRLG-AVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNA------------DDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM
General information:
TITO was launched using:
RESULT:
Template:
4BO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107822 for 1977 contacts (-54.5/contact) +
2D Compatibility (PS) -25562 + (NN) -9773 + (LL) 1336
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -164771.0 ( -83.34 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_4BO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BO7-query.scw
PDB file :
Tito_Scwrl_4BO7.pdb
: