Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENFLYQLEIKTLGQVFTPKNIVDFMLIL--KHNHGSVLEPSAGDGSFLKRLKKA-------VGIEIDPKICP----KNALCMDFFDYPLENQFNTIIGNPPYVKHKDIAPSTKEKLH-YSLFDERSNLYLFFIEKAIKHLKPKGELIFITPRDFLKSTSSVKLNEWIYKEGTITHFFELGDQKIFPNAMPNCVIFRFCKGDFSRITNDGLQFVCKKGILYFLNQSYTQKLSEVFKVKVGAVSGCDKIFKNETYGNLEFVTSITKRTNVLEKMVFVNKPNDYLLQHK--DSLMQRKI--KKFNENNWFEWGRMHH---ISPKKRIYVNAKTHQKNPFFI-HQCPNYDGSILALFPYNQNLDLQNLCDKLNAINWQELGFVCDGRFL--FSQRSLENALLPKDFLN-- |
| 2ADM Chain:A ((21-413)) | ---------------VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTGYRFVGVEIDPKALDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIVGVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYL---GEVFPQKKVSAVVIRFQKSG----KGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLLPKEGVRLDPSTLVQWLNSEAMQKHVRTLYRDFVPHLTLRMLERLPVRREYGFHT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ADM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119666 for 2773 contacts (-43.2/contact) +
2D Compatibility (PS) -37874 + (NN) -10631 + (LL) 1812
1D Compatibility (HY) -13200 + (ID) 4050
Total energy: -183609.0 ( -66.21 by residue)
QMean score : 0.307
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