Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTE------SHSGMLEKF--YKAGKRID--KDYKKQ--VVELKG----H--IPFKD--SFKEETLENFT----NLLKEHRITPSYKTDIESVKKEGELFKITTTSN--TTYHAKFVVVAIGKMGQPNRPTTYKI-PV--ALSKQVVFSINDCKENEKTLVIGGGNSAVEYAIALCKTTP-TTLNYRKKEF-SRINEDNAKNLQEVLDNNTLKSKLGVDIESLEEDNTQIKVNFTD---NTSESFDRLLYAIGGSTPLE--FFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAIEIAKRLQS |
| 3LAD Chain:A ((1-343)) | --SQKFDVIVIGAGPGGYVAAIKSAQLGLK-TALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHG-KLLA--GKKVEVTAADGSSQVLDTENVILASGS--KPVEI-PPAPVDQDVIVDSTGALDF--QNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDER-GFIYVDDYCAT-SVPGVYAIGDVVRG-AMLAHKASEEGVVVAERIAGHKAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129589 for 2469 contacts (-52.5/contact) +
2D Compatibility (PS) -32202 + (NN) -1417 + (LL) 444
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -181114.0 ( -73.36 by residue)
QMean score : 0.397
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