Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLETSSHFLKSFRLKRYIGFLLISLALLITPFVRIDGAHLFLISFEHKQLHFLGKIFSAEELQILPFMVILLFIGIFFITTSLGRVWCGWACPQTFLRVLYRDVIETKIFKLHKKISNKQESPKNTPSYKIRKALSVLLFAPVVAGLMMLFFFYFIAPEDFFMYLKNPSDHPIAMGFWLFSALVVLFDIVVVAERFCIYLCPYARVQSVLYDNDTLNPIYDEKRGGVLYDNQGRLFPLPPKKRSAENECVNCLHCVQVCPTHIDIRKGLQLECINCLECVDACTITMAK---YNRPSLIQWSSTNAINTRQKVRLVRLKTIAYMGVIAVVVALLIITSFKKERMLLDINRNSDLYEIRSSG-YVDNDYVFLFHNTDNKDHEFYFKILGQKDIQIKKPLNPIAIKAGQKIKAVVILRKPLK-GNATEYKHAKDALIPITIQAYSVDDKNITIERESVFIVPSED |
4K5Y Chain:A ((13-423)) | -------HYHVAAIINYLGHC-ISLVALLVAFVLFLRA---------RSIRCLRNIIHANLIAAFILRNATWFVVQLTMSPEVHQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTNIFEMLRIDEGLRLKIYKDT-EGYYTIGIGHLLTKSPSLSVAKSELDKAIGRN---------SNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS---------------LDAVRRSALINMVFQMGETGVAGFTNSLRMLQQKR-------WDEAAVNLAKSRWYNQTPNRAKRVIATFRTGTWDAYDRLRAWMFI-CIGWGVPFPIIVAWAIGKLYYD---NEKCWAGKRPGVYTDYIYQGPMALVLLINFIFLFNIVRILMTKLRASTTSETIQARKAVKATLVLLPLLGITYMLAFVNEVSRVVFIYFNAFLESFQGFFVSVFACFLNS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131789 for 3002 contacts (-43.9/contact) +
2D Compatibility (PS) -40648 + (NN) 2691 + (LL) 4116
1D Compatibility (HY) -18800 + (ID) 3350
Total energy: -187780.0 ( -62.55 by residue)
QMean score : 0.009
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