Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTRFKKAFISYSLGVLVVSLLLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIGSYVEVPAMLNVWDRVVGVSDYAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFL---SFQETTIAEAMQAMQAQATVL--EIDASKKFAKMQETLDFIAERLKGVKKKKGVELFHKAN---KISGHQAISSDILEKGGIDN-FGLKYVKFGRADISVEKIVK-ENPEIIFIWWVSPLTPEDVLNNPKFSTIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEIEPFLWH |
| 1EFD Chain:N ((2-263)) | ---GIDPNRIVALEWLPVELLLALGI-------------------------------------------VPYGVADTINYRLWVSEPPLPDSVIDVGLRTE-----PNLELLTEMKPSFMVWSAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYEDFIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWGSTAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYGATLSAMHFVRVLDNAIG-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120780 for 2044 contacts (-59.1/contact) +
2D Compatibility (PS) -27039 + (NN) -8185 + (LL) 6812
1D Compatibility (HY) -10400 + (ID) 1800
Total energy: -161392.0 ( -78.96 by residue)
QMean score : 0.441
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