Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------MYKK-LATVGMTVLLVGALSACSFNDDK-DTSSNNSNNETTSSKSSNNESSSDSLQNKSLDMSYEDAINAFKDKHSDAE----------ISSVELEKSLGKYVYKVDGISNDNEYEMKFNAETKEQLSDETDRLDREDAGGVEKE-NEKLSLDGIKSPKEAMD-----KAVSEQAGDVTSWKIERELDTTYYEVTVKQDNNKYEIKL--------------------NAKTLEILQTEQDD--------- |
4RWR Chain:A ((55-323)) | VYREKQKKVESLPMEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTDQVYK---SKEELKKQWGNNYENNLKKIEEAVSKTAGQVLTYEGKPISASFFSTSNGRTENAADYWGNDYPY-LKSVDSPWDQASPKFTSEQIFTVADFQKRLGVKVLADGKVGDIKGRTEGKRVKDVAFQGKTLTGRDVRDKLELRSSDFTWKQEGDKIVVTTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYYKGVEIKTMNDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 59181 for 1289 contacts (45.9/contact) +
2D Compatibility (PS) -20993 + (NN) -3831 + (LL) 152
1D Compatibility (HY) -800 + (ID) 1950
Total energy: 31759.0 ( 24.64 by residue)
QMean score : 0.311
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