Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --LYEKLVNKYQDEVTIREEKMPYKLPGLYLN-----------GMIFISKDQSSIEKGCVLVEELMHYKYTVGNITKQETIMDKK-QEIFARRKGYEELIP-------LDDIIACFYLGLREYFEVAEFLEVTEEFLRH--TVSHYAEKYGPMYDYGGYFINFGNSIDVYKKF--------------------------------------------------- |
| 4I17 Chain:A ((4-226)) | TTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKAMI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16229 for 1053 contacts (-15.4/contact) +
2D Compatibility (PS) -15103 + (NN) 1164 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 1250
Total energy: -33418.0 ( -31.74 by residue)
QMean score : 0.201
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