Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------MKMLKKGTAVLFV------MIMAVM---------LVACGDKEE-TKTYTLSQNGVDSKLTYTYKGDKVTKQTAENTM-SYASLGVA--SKEDAEKMLKATSDKFQ--GIDGLKEKIEYKDDKAIETLEVDYTKISSE---DMNKIPGMSSNGDTS-KGISMEESAKMLESQGYKEVSK-------------- |
| 1IM8 Chain:A ((20-244)) | FIFDENVAEVFPDMIQRSVPGYSNIITAIGMLAERFVTADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSEKFRFEDTKINHLLIDLHHQFKRANGYSELEVSQKRTALENVMRTDSIETHKVRLKNVGFSQVELWFQCFNFGSMIAVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28074 for 951 contacts (-29.5/contact) +
2D Compatibility (PS) -16093 + (NN) -161 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 900
Total energy: -52028.0 ( -54.71 by residue)
QMean score : 0.463
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