Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRLKEDIATIIKNDPATKSFFDAFLTNPGLHALWWHRVANFFYRHKMVLFGKVLSQNARFWTNIEIHPGATIGRRLFIDHGAGIVIGETAEIGDDVTIFHGVTLGGTGKDCGKRHPTVGDGALVSAGAKVLGPVEIGAGARIGAGAVVLKDVPPGATVVGIPAKVVRLNGRTVGHAVPKMDELTLRIAELENIVEKLLKEKE
1SST Chain:B ((80-240))
-------DIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSLALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGT-----DRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123391 for 1295 contacts (-95.3/contact) +
2D Compatibility (PS) -16627 + (NN) -7342 + (LL) 3408
1D Compatibility (HY) -14000 + (ID) 3200
Total energy: -161152.0 ( -124.44 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_1SST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SST-query.scw
PDB file :
Tito_Scwrl_1SST.pdb
: