Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRS--KEKGADLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAPGNRQVEHE-----NVINAAKKAGVSYIAYTSFAGADKSTS-----ALAEDHFFTEKVIEKSGIAHTFLRNNWYFENEMPMIGGALSA-GKFVYAA---ENGKVGWALKREYAEVAAKAVAGAGFPE--ILELSGPLMTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDALRELLK---- |
| 2WM3 Chain:A ((4-299)) | DKKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLGFP--GARDLANMFRFYALRPDRD------IELTLRLNPKALTLDQWLEQHKGDFNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105538 for 2210 contacts (-47.8/contact) +
2D Compatibility (PS) -30164 + (NN) -18480 + (LL) 428
1D Compatibility (HY) -3200 + (ID) 2650
Total energy: -159604.0 ( -72.22 by residue)
QMean score : 0.515
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