Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MIVIIDYDTGNTKSISKALDFIGLQNKI--SSDATEISQADGVILPGVGAYPEAMKELTRRGLNKTLKEIAAGGKPILGVCLGMQLLLESSNEHSFTNGLGLIPGHVEKLPEDPEFAVPHMGWNQLQIKRATPLTKQLDGEYVYYVHSYYANCPEE---------YIIATSGY-SIEVPGMINKGNIYGAQFHPEKSGQIGLEILKGFKEVTYSCKSSQQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1JVN Chain:A ((1-555)) | GSHMPVVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKDFNISGTSRLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGI-VGLQALFAGSVESPKSTGLNYIDFKLSRF-DDSEKPVPEIGWNSCI-PSENLFFGLDPYKRYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNKNNIFATQFHPEKSGKAGLNVIENFLKQQSPPIPNYSAEEKELLMNDYSNYGLTRRIIACLDVRTNDQGDLVVTKGDLGKPVQLAQKYYQQGADEVTFLNITDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKVRMDEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87676 for 1652 contacts (-53.1/contact) +
2D Compatibility (PS) -22421 + (NN) -11346 + (LL) 120
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -141123.0 ( -85.43 by residue)
QMean score : 0.464
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