Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MTAFDLEDFLTTAITDYAKEKVEAGTWDEEESLAKSQDSFNKLLYDGITTPNEYLYSII---SGEKIGYIWFHVDETRSGK---HAFIYDFVIFEAFRGKGFGTKTLAALDVLAKEMQITKIGLHVFAHNQTAIGLYNKVGFQNTDITMAKYL
1I12 Chain:A ((4-160))
LPDGFYIRRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDKKIMQYNPMVIVDKRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDC---DEKNVKFYEKCGFSNAGVEMQIRK
General information:
TITO was launched using:
RESULT:
Template:
1I12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77342 for 950 contacts (-81.4/contact) +
2D Compatibility (PS) -15262 + (NN) -2633 + (LL) 320
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -100417.0 ( -105.70 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_1I12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I12-query.scw
PDB file :
Tito_Scwrl_1I12.pdb
: