Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPHNDVETLLQKGL
4RBU Chain:C ((10-97))
--EALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGQGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKG-
General information:
TITO was launched using:
RESULT:
Template:
4RBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39079 for 686 contacts (-57.0/contact) +
2D Compatibility (PS) -9867 + (NN) -4678 + (LL) 304
1D Compatibility (HY) -10400 + (ID) 3600
Total energy: -67320.0 ( -98.13 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_4RBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RBU-query.scw
PDB file :
Tito_Scwrl_4RBU.pdb
: