Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENNVPLFGAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPGTVGNNKKVVANVIESAGMEALYTIDEPTAAAAVLDL-----QNGAVVDVGGGTTGISVFENGEVIYTADEPTGGTHMTLVLAGYYGVPVEEAEQNKRAQKDSSEHFSVMRPVVEKMAEITRVHLEKSPSEPLYIVGGASAYSQFKDTFESYLKMPVFQPNYPQYVTPLGIAMSSGSENL--------------------------------------------------------------------------------------- |
| 1DKG Chain:D ((3-383)) | KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIM----PFKIIAADNGDAWVEV--KG----QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKTGNRTIAVYDLGGGTFDISIIEIDEKTFEVLA---TNGDTHLGGEDFDSRLINYLV-EEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSS-----------------------------AQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -504 for 1639 contacts (-0.3/contact) +
2D Compatibility (PS) -24391 + (NN) 192 + (LL) 2408
1D Compatibility (HY) 1600 + (ID) 2350
Total energy: -23045.0 ( -14.06 by residue)
QMean score : 0.251
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