Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MIYVIGIGPGDKRLMTGEALQAIEDAEVIV-------GYVTYIKLIKELIK----DKEVV---------KTGMRREIDRCQEAVDIAL-TGKKVAVVSSGDAGIYGMAGLVLELAEKSNPDLEVKVIPGITASIGAAAVLGAPIMHDFCHISLSDLMTPWEVIEKRLTHAAMADFVVCFYNPRSKGRANHLANAFQKMMEHKSGDTVVGIVKDVGRKEERKIITTMQGIDYELVDMTTVVIVGNKETYVKNGKMITPRGYSL
2QBU Chain:A ((1-228))
MHGKLIGVGVGPGDSELLTLRAVNVLRSVPVICAPRSSSERESIALSIVEDILTERRDGCRILDPVFPMTDDRDELESHWDSAARMVAAELEDGRDVAFITLGDPSIYSTFSYLQQRIED--MGFKTEMVPGVTSFTACAATAGRTLVEG--DEILLVVPRVDDRFERVLRDV---DACVIM-------KTSRHGRRAMEVVESDPRGKDVVSVANCSMDDEVVERGFASGGGY----LATTLVRF-------------------
General information:
TITO was launched using:
RESULT:
Template:
2QBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -204318 for 1613 contacts (-126.7/contact) +
2D Compatibility (PS) -23359 + (NN) -10905 + (LL) 1600
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -248132.0 ( -153.83 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_2QBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QBU-query.scw
PDB file :
Tito_Scwrl_2QBU.pdb
: