Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIA-SSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
1WOZ Chain:A ((19-174))
---------------------GKDSPLVNFLGDLDELNSFIGFAISKIPW-EDMKKDLERVQVELFEIGEDLSTQSSK--KKIDEKYVKWLEERTVEYRKESGPVKLFVIPGGSEEASVLHVTRSVARRVERNAVKYTKELPEINRMIIVYLNRLSSLLFAMALVANKRRNVSEKIYDIG---------
General information:
TITO was launched using:
RESULT:
Template:
1WOZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57181 for 1173 contacts (-48.7/contact) +
2D Compatibility (PS) -17059 + (NN) -7503 + (LL) 2232
1D Compatibility (HY) -12800 + (ID) 2950
Total energy: -95261.0 ( -81.21 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_1WOZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WOZ-query.scw
PDB file :
Tito_Scwrl_1WOZ.pdb
: