Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVALNPDAE
4J6X Chain:B ((5-70))
-----HSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLK-NTVSQMVYKHAISTVVPSRPVRL-----
General information:
TITO was launched using:
RESULT:
Template:
4J6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43396 for 410 contacts (-105.8/contact) +
2D Compatibility (PS) -7001 + (NN) -1123 + (LL) 192
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -60928.0 ( -148.60 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_4J6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J6X-query.scw
PDB file :
Tito_Scwrl_4J6X.pdb
: