Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKLTKIQETLGKEKIEAVLV--------------TSEFNRRYVSGFTGTSGVALILP----EKAYFVTDFRYT-EQAAKQ-------AE---GYEIVQHTGPIFDTVEDLLIKNDTKTLHFE--------ADYVTVSEFKQMERVFNR-QLIPLTGFFEEMRKVKTASELKAIRTACDIADAAFAHIIQFIKPGMAEIEVSNELEFFMRRAGATSSSFDTIVASGIRSALPHGVASDKKIEVGDFVTMDYGCYYDGYCSDMTRTIAV-GEPAEKLKEIYQITLDAQLKVIDSLKPGMTGIEADAIARDYISSF----GY-------GDAFGHSLGHGIGLEIHEGPNLSFKSPQKLEVGHVVTDEPGIYLPG-IGGVRIEDDLLITETGNEILIH-SPKELIIL |
3IG4 Chain:A ((8-407)) | -QNRERLVNTLPDESITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPNVIFMLKKFGNSVEETLFIEKSDPVMEKWVGKTVSNEEAEKISGIKKVIYLDSFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVREQYPHVTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSSGIKHHAFNTILASGKNATVLHYEDNDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLGLDTHDVGT---YKDRVLEEGMVITIEPGLYIEEESIGIRIEDDILVTKDGHENLSKDIIREVEE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140082 for 2732 contacts (-51.3/contact) +
2D Compatibility (PS) -37847 + (NN) -12451 + (LL) 664
1D Compatibility (HY) -16400 + (ID) 4300
Total energy: -210416.0 ( -77.02 by residue)
QMean score : 0.452
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